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Microscope Interference Patterns

Note

For this section of the guide, we will be disabling all other effects in order to clearly show each option.

The Virtual Microscope supports a few configuration options regarding the addition of interference patterns to generated images.

Parameter Description
EnableInterferencePattern Enable or disable the generation of interference patterns
InterferencePatternXScale_um Set the number of lines per unit of x distance
InterferencePatternAmplitude Set the color variation from interference patterns (larger means brighter peaks and darker valleys)
InterferencePatternBias Set the intensity bias for interference patterns, 0 indicates do not change, positive means brighter, negative darker
InterferencePatternWobbleFrequency Set the number of y-axis wobbles per unit of y distance
InterferencePatternYAxisWobbleIntensity Set the size of the y-axis wobbles
InterferencePatternStrengthVariation Set the amount that the intensity of interference patterns is randomized image-to-image
InterferencePatternZOffsetShift Enable or disable randomization of patterns between layers

Example

Enable or disable the generation of interference patterns.


Setting EnableInterferencePattern to False results in the following image:

Default Render Example

EMConfig.EnableInterferencePattern = False

Likewise, setting it to True will result in the following image: Default Render Example

EMConfig.EnableInterferencePattern = True

The X Scale determines how frequent the vertical lines from the interference pattern are.


Setting it to 40 will result in the following image: Default Render Example

EMConfig.InterferencePatternXScale_um = 40

Likewise, setting it to 10 will result in the following image: Default Render Example

EMConfig.InterferencePatternXScale_um = 10

This sets amount that the colors vary from peak to valley.


Setting it to 25 will result in the following image: Default Render Example

EMConfig.InterferencePatternAmplitude = 25

Likewise, setting it to 0 will result in the following image: Default Render Example

EMConfig.InterferencePatternAmplitude = 6

Brightens or darkens the interference pattern.


Setting it to -40 will result in the following image: Default Render Example

EMConfig.InterferencePatternBias = -40

Likewise, setting it to 40 will result in the following image: Default Render Example

EMConfig.InterferencePatternBias = 40

This documentation is provided by BrainGenix, a division of Carboncopies Foundation R&D. BrainGenix is a platform focused on advancing the field of whole-brain-emulation and computational neuroscience. BrainGenix is part of the CarbonCopies Foundation, a 501(c)3 non-profit organization dedicated to researching and promoting whole brain emulation. Learn more about CarbonCopies at https://carboncopies.org. For any queries or feedback regarding BrainGenix projects or documentation, please write to us at braingenix@carboncopies.org.